{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":61289155,"defaultBranch":"master","name":"projpred","ownerLogin":"stan-dev","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2016-06-16T11:57:54.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/3374820?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1724182420.0","currentOid":""},"activityList":{"items":[{"before":"288d9489fd737d4546ff3e8b574c438b750db85c","after":"8aacd5df89653a32a0a29dd85cb367ef26a2edcc","ref":"refs/heads/fix-subsampling","pushedAt":"2024-09-18T20:18:14.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"fixup! remove unused `mu_baseline` (only unused in case of\n\nThis fixes commit 0d73c8ea69724e29b7d183bb973b1f53fc1eeac6. However, before\ncommit 0d73c8ea69724e29b7d183bb973b1f53fc1eeac6, `is.null(mu_baseline)` should\nhave never occurred because if `summaries_baseline` was `NULL`, then\n`mu_baseline` was set to `0` (and if `summaries_baseline` was not `NULL`, then\n`mu_baseline` was set to `summaries_baseline$mu` which should not be `NULL`\neither). Hence, this fixup here does not only fix commit\n0d73c8ea69724e29b7d183bb973b1f53fc1eeac6, but also the incorrect behavior which\nexisted before it.","shortMessageHtmlLink":"fixup! remove unused <code>mu_baseline</code> (only unused in case of"}},{"before":"0d73c8ea69724e29b7d183bb973b1f53fc1eeac6","after":"288d9489fd737d4546ff3e8b574c438b750db85c","ref":"refs/heads/fix-subsampling","pushedAt":"2024-09-15T19:16:23.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"Merge remote-tracking branch 'upstream/master' into fix-subsampling","shortMessageHtmlLink":"Merge remote-tracking branch 'upstream/master' into fix-subsampling"}},{"before":"69478f8c6b217660bddb272bc4d80431ea7c11b2","after":"6d945b03f5fea376653e29d120607769d29e6fee","ref":"refs/heads/master","pushedAt":"2024-09-15T19:15:43.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"Tests: Choose a new `nobsv` value to avoid spurious errors on other machines.","shortMessageHtmlLink":"Tests: Choose a new <code>nobsv</code> value to avoid spurious errors on other m…"}},{"before":"519dac268d130a593713f75ed6f5370b25392be0","after":"8aa8b8e83222148c3a27664daf78e7586a554ba4","ref":"refs/heads/mixed_deltas_plot","pushedAt":"2024-08-30T19:42:54.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"remove unused `mu_baseline` (only unused in case of\n\n`is.null(summaries_baseline)`); one reason is that I'm not sure whether it was\nsupposed to read `mu_baseline <- y` in that case (instead of `mu_baseline <- 0`)","shortMessageHtmlLink":"remove unused <code>mu_baseline</code> (only unused in case of"}},{"before":"a7458b98f8efbf255966c29769ac6fe08ce9253a","after":"0d73c8ea69724e29b7d183bb973b1f53fc1eeac6","ref":"refs/heads/fix-subsampling","pushedAt":"2024-08-30T19:16:10.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"remove unused `mu_baseline` (only unused in case of\n\n`is.null(summaries_baseline)`); one reason is that I'm not sure whether it was\nsupposed to read `mu_baseline <- y` in that case (instead of `mu_baseline <- 0`)","shortMessageHtmlLink":"remove unused <code>mu_baseline</code> (only unused in case of"}},{"before":"519dac268d130a593713f75ed6f5370b25392be0","after":"a7458b98f8efbf255966c29769ac6fe08ce9253a","ref":"refs/heads/fix-subsampling","pushedAt":"2024-08-26T23:51:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"move out the new \"mixed deltas\" variant of `plot.vsel()`, the\n\nnew column behavior of `summary.vsel()`, and the omittance of option `\"best\"` of\nargument `baseline`","shortMessageHtmlLink":"move out the new \"mixed deltas\" variant of <code>plot.vsel()</code>, the"}},{"before":"8dde0bc19d296e14ec1d1b216e72996d8e6a5b2c","after":"519dac268d130a593713f75ed6f5370b25392be0","ref":"refs/heads/mixed_deltas_plot","pushedAt":"2024-08-26T23:51:01.000Z","pushType":"push","commitsCount":18,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"fixup! `loo_inds` as stored in `vsel` objects was unused so far","shortMessageHtmlLink":"fixup! <code>loo_inds</code> as stored in <code>vsel</code> objects was unused so far"}},{"before":"348827c6dc5ffca9590b6006fa1234ab319d14ce","after":"519dac268d130a593713f75ed6f5370b25392be0","ref":"refs/heads/fix-subsampling","pushedAt":"2024-08-26T23:20:56.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"fixup! `loo_inds` as stored in `vsel` objects was unused so far","shortMessageHtmlLink":"fixup! <code>loo_inds</code> as stored in <code>vsel</code> objects was unused so far"}},{"before":"81ec4952e4c048a8422b4ddb7d8d087a6a18eac6","after":"348827c6dc5ffca9590b6006fa1234ab319d14ce","ref":"refs/heads/fix-subsampling","pushedAt":"2024-08-26T22:25:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"Revert \"avoid redundant computations by moving `sqrt(srs_diffe$v_y_hat + srs_diffe$hat_v_y)` into `.srs_diff_est_w()`\"\n\nThis reverts commit 2727cff3b74df2af800cd37b4fa9a309bc96be89.\n\nReason for the revert: See <https://github.com/stan-dev/projpred/commit/2727cff3b74df2af800cd37b4fa9a309bc96be89#commitcomment-145785150>.","shortMessageHtmlLink":"Revert \"avoid redundant computations by moving `sqrt(srs_diffe$v_y_ha…"}},{"before":"2d9a6522a8369a659ea5c7a7192c09b43ed6a66a","after":"81ec4952e4c048a8422b4ddb7d8d087a6a18eac6","ref":"refs/heads/fix-subsampling","pushedAt":"2024-08-23T20:59:24.000Z","pushType":"push","commitsCount":10,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"add a comment and a check in `loo_varsel()` for `!validate_search && nloo < refmodel[[\"nobs\"]]`","shortMessageHtmlLink":"add a comment and a check in <code>loo_varsel()</code> for `!validate_search &amp;&amp; …"}},{"before":"8dde0bc19d296e14ec1d1b216e72996d8e6a5b2c","after":"2d9a6522a8369a659ea5c7a7192c09b43ed6a66a","ref":"refs/heads/fix-subsampling","pushedAt":"2024-08-23T05:26:08.000Z","pushType":"push","commitsCount":5,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"add comments in `summary_funs.R`","shortMessageHtmlLink":"add comments in <code>summary_funs.R</code>"}},{"before":"b9f836841df1932654fb40cdc19ab137b84a5aff","after":"8dde0bc19d296e14ec1d1b216e72996d8e6a5b2c","ref":"refs/heads/mixed_deltas_plot","pushedAt":"2024-08-22T18:36:20.000Z","pushType":"push","commitsCount":8,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"fix verbose message","shortMessageHtmlLink":"fix verbose message"}},{"before":"750c81a4e4daee1769b9cf4d5218d5864f4d8eef","after":"8dde0bc19d296e14ec1d1b216e72996d8e6a5b2c","ref":"refs/heads/fix-subsampling","pushedAt":"2024-08-22T18:35:58.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"fix verbose message","shortMessageHtmlLink":"fix verbose message"}},{"before":"b9f836841df1932654fb40cdc19ab137b84a5aff","after":"750c81a4e4daee1769b9cf4d5218d5864f4d8eef","ref":"refs/heads/fix-subsampling","pushedAt":"2024-08-20T20:40:13.000Z","pushType":"push","commitsCount":6,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"fix a message when using standard importance sampling (SIS)","shortMessageHtmlLink":"fix a message when using standard importance sampling (SIS)"}},{"before":null,"after":"b9f836841df1932654fb40cdc19ab137b84a5aff","ref":"refs/heads/mixed_deltas_plot","pushedAt":"2024-08-20T19:33:40.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"for argument `verbose`, default to a new global option:\n\n`getOption(\"projpred.verbose\", interactive())`","shortMessageHtmlLink":"for argument <code>verbose</code>, default to a new global option:"}},{"before":"d1d37bd1d0ae17bb60ea19b264ea179a3c13351f","after":"b9f836841df1932654fb40cdc19ab137b84a5aff","ref":"refs/heads/fix-subsampling","pushedAt":"2024-08-20T19:32:31.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"for argument `verbose`, default to a new global option:\n\n`getOption(\"projpred.verbose\", interactive())`","shortMessageHtmlLink":"for argument <code>verbose</code>, default to a new global option:"}},{"before":"7616128f6d7144bb4d9a756bd6dae54c31e3eb86","after":"d1d37bd1d0ae17bb60ea19b264ea179a3c13351f","ref":"refs/heads/fix-subsampling","pushedAt":"2024-08-18T22:55:53.000Z","pushType":"push","commitsCount":6,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"fix input for argument `search_path_fulldata` when running fast LOO-CV for subsampled PSIS-LOO-CV","shortMessageHtmlLink":"fix input for argument <code>search_path_fulldata</code> when running fast LOO-C…"}},{"before":"99e9c7944cc0a884d234f33312f39d75e5d9aed0","after":"7616128f6d7144bb4d9a756bd6dae54c31e3eb86","ref":"refs/heads/fix-subsampling","pushedAt":"2024-08-18T07:44:21.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"mention thinning in the verbose message which gives information about\n\nthe clustering/thinning used","shortMessageHtmlLink":"mention thinning in the verbose message which gives information about"}},{"before":"fc8c6655af516ed0a028eca5149734fe40f72ebe","after":"99e9c7944cc0a884d234f33312f39d75e5d9aed0","ref":"refs/heads/fix-subsampling","pushedAt":"2024-08-13T10:12:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"avehtari","name":"Aki Vehtari","path":"/avehtari","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6705400?s=80&v=4"},"commit":{"message":"fixes","shortMessageHtmlLink":"fixes"}},{"before":"6b6520abebd8f32f9a4d03931edd9b738b75bcc8","after":"fc8c6655af516ed0a028eca5149734fe40f72ebe","ref":"refs/heads/fix-subsampling","pushedAt":"2024-08-12T19:18:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"avehtari","name":"Aki Vehtari","path":"/avehtari","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6705400?s=80&v=4"},"commit":{"message":"move code for deltas='mixed' to plot.vsel","shortMessageHtmlLink":"move code for deltas='mixed' to plot.vsel"}},{"before":"d9fdbaf1ba842ae247256426505b430d49d3bba7","after":"6b6520abebd8f32f9a4d03931edd9b738b75bcc8","ref":"refs/heads/fix-subsampling","pushedAt":"2024-08-11T14:36:47.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"avehtari","name":"Aki Vehtari","path":"/avehtari","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6705400?s=80&v=4"},"commit":{"message":"attempt to fix vsel.summary","shortMessageHtmlLink":"attempt to fix vsel.summary"}},{"before":"b6fe949739da14c1496dfcf2fb049e084e9827de","after":"d9fdbaf1ba842ae247256426505b430d49d3bba7","ref":"refs/heads/fix-subsampling","pushedAt":"2024-07-17T21:25:43.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"don't include the argument content in the message as the argument content may be a list, for example","shortMessageHtmlLink":"don't include the argument content in the message as the argument con…"}},{"before":"d663df89a33a3afeabcec0c6d2f282d90fe63ec6","after":"b6fe949739da14c1496dfcf2fb049e084e9827de","ref":"refs/heads/fix-subsampling","pushedAt":"2024-07-17T21:22:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"minor cleaning for consistency","shortMessageHtmlLink":"minor cleaning for consistency"}},{"before":"118838cf1b30836422ccdf3ef1f1fdb5fa6c7e68","after":"d663df89a33a3afeabcec0c6d2f282d90fe63ec6","ref":"refs/heads/fix-subsampling","pushedAt":"2024-07-17T21:10:31.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"fix a bug when checking arguments in `cv_varsel.vsel()`","shortMessageHtmlLink":"fix a bug when checking arguments in <code>cv_varsel.vsel()</code>"}},{"before":"b81e4014268e2c933ae5a0013bd6318325640d55","after":"118838cf1b30836422ccdf3ef1f1fdb5fa6c7e68","ref":"refs/heads/fix-subsampling","pushedAt":"2024-07-15T20:42:37.000Z","pushType":"push","commitsCount":11,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"remove `.select <- .select` (the issue does not occur when installing\n\nprojpred (instead of using `devtools::load_all()`))","shortMessageHtmlLink":"remove <code>.select &lt;- .select</code> (the issue does not occur when installing"}},{"before":"c23fa783b1dc044cbe4e52e25682e530192f6fde","after":"b81e4014268e2c933ae5a0013bd6318325640d55","ref":"refs/heads/fix-subsampling","pushedAt":"2024-07-04T18:36:27.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"Merge remote-tracking branch 'upstream/master' into fix-subsampling","shortMessageHtmlLink":"Merge remote-tracking branch 'upstream/master' into fix-subsampling"}},{"before":"28e011789ea2b5ad2743c7821bc88b2ca2c76a77","after":"69478f8c6b217660bddb272bc4d80431ea7c11b2","ref":"refs/heads/master","pushedAt":"2024-07-04T18:35:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"re-document with roxygen2 v7.3.2","shortMessageHtmlLink":"re-document with roxygen2 v7.3.2"}},{"before":"10ab731b5a20fd86cd1160d4998a76592b056fc3","after":"c23fa783b1dc044cbe4e52e25682e530192f6fde","ref":"refs/heads/fix-subsampling","pushedAt":"2024-06-30T20:15:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"re-add a comment","shortMessageHtmlLink":"re-add a comment"}},{"before":"1fc4669a4b7dc123cc9a709a92ededfc2a9cb63b","after":"10ab731b5a20fd86cd1160d4998a76592b056fc3","ref":"refs/heads/fix-subsampling","pushedAt":"2024-06-30T20:00:24.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"rename remaining occurrences of `wcv` to `wobs`","shortMessageHtmlLink":"rename remaining occurrences of <code>wcv</code> to <code>wobs</code>"}},{"before":"9bdc06a6d10e8cd24edafe1eec3e180043ae8aca","after":"28e011789ea2b5ad2743c7821bc88b2ca2c76a77","ref":"refs/heads/master","pushedAt":"2024-06-30T19:36:31.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"fweber144","name":"Frank Weber","path":"/fweber144","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55132727?s=80&v=4"},"commit":{"message":"Tests: Running with CmdStan v2.35.0 revealed that a tolerance was set too tight.","shortMessageHtmlLink":"Tests: Running with CmdStan v2.35.0 revealed that a tolerance was set…"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEuiC03AA","startCursor":null,"endCursor":null}},"title":"Activity · stan-dev/projpred"}